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The prologue to this is actually called the ultimate fanfiction, or something like that, but I've changed it's title becuase I saw other fanfictions and I didn't want to offend anyone by sugesting my stories are superier- which they probably are now. Anyway, here's chapter 1.

Ch.1 clues

I stayed with the three remaining penguins that night. Skipper had decided we would search for clues the next morning, with our minds cleared from sleep. Sleep was exactly what I couldn't do though. With my morphing into a penguin, and Kowalski's dissapearance, who knew what would happen next.

I woke up the next morning to the smell of fish and coffee, and my back aching from the slits in the stone wall they considered beds.
Skipper was already awake, with his morning coffee. Private was going through the fridge in search of a juice box while Rico was preparing to make sushi. I hopped out of the bed and onto the ground.
"You're finally awake," Skipper said, "I was getting ready to wake you myself. We have to search for clues of Kowalski's dissapearance before the zoo opens."
I yawned, "The best place to start is his lab, I guess." I turned to the door of the lab and stepped foreward.
"Woah" Skipper called behind me, "Arn't you going to wait for Rico to make the sushi first?"
I looked over as Rico began chopping up the raw fish.
"Breakfast is the most important meal of the day," Skipper continued.
Even though I was technically a penguin now, the sound of raw fish still discusted me.
"I'm not really that hungry," I said before opening the door.
They had been right the night before. When I looked inside I could easily tell that most of the technology had vanished, even though I had never seen the place in person-... penguin. Whatever was left was in a mess, which I couldn't imagine Kowalski leaving it that way on purpose.
"Was Kowalski acting strangly before he dissapeared?"I called to the other three as I started going through his stuff.
"Not that I could tell," Skipper replied.
"I didn't notice anything either," came Private's accent.
"Uh-uh" Rico grunted.
"Okay..." I said to myself, my thoughts tumbling in my head, "Well, did he have any enemies? Anyone that didn't like him and wanted to hurt him somehow?"
"Only a snail," Skipper said, trying not to laugh, "But that was quite a while ago," the note in his voice was serious again, "I doubt it was the snail."
"What about an enemy to someone else in your team, who knew about all four of you and possably some of your weaknesses?"
The earth suddenly started to shake, and a loud rumble blocked out any possable answers. It was over in a second, but by then I had lost my balence and had fallen on the floor.
"What was that?!" Skipper exclaimed angrily.
"It sounded like an explotion!" Private said.
added by Niss_Deniclyn
Source: Cute-Astrophe
added by Cowtails
added by Cowtails
added by Tressa-pom
Source: King Julien for A Day
added by PenguinStyle
added by PenguinStyle
added by PenguinStyle
It was just like any other day....skipper had the other three and himself stand outside of their lair....the three were confused on why they were there...

Skipper:alright men....we need to be stronger...that's why we all our gonna train seperate in different spots...train by ourselves...you may never know if blowhole or Hans or anyone might strike...

Private: by ourselves though....?

Skipper gave him a glare and a serious look..

Skipper:yes private... By yourself! You need to learn to defend yourself by yourself!

Private: yes sir....

Skipper: alright men! Go find a spot and train yourself! Meet back...
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posted by spmana123
Silence....that's all I could hear in that tiny room. The smell was overwhelming, probably because of Rico's corpse, I could tell that we were all losing it, I couldn't tell how long Kowalski was going to last anymore.

Private: skipper....I miss Rico...

I looked over at private to try and comfort him, but I could tell between his reared eyes, that he wanted to get out of here, away from it all.

Skipper:I know you do private, we all do....but there's nothing we can do to bring him back

Huh.....it's funny.....I'll never see Rico again...never see his crazy ideas when we go on a mission, never to...
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It was a brigh and sunny day at the CPZ, all the zoo residents were still asleep. All except for Team Penguin. Team Penguin consists of 4 trained penguin commandos...
_____________________________________
Skipper, leader of the group and second shortest in height. Description: Flat head, sapphire blue eyes, wide orange beak, orange webbed toes, night black back, flippers, top of head and upper tail feathers and white feathers everywhere else. He's stubborn, stern, fierce but is also kind, caring and protective.

Next there's Kowaski, the lieutenant (A/N: Does anyone know how to pronounce lieutenant?)...
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posted by legendary7
The penguins were far on their way. The morning turned to a sweltering afternoon. Later, that shifted to a chilling night. The waves rocked mellowly.
Private glided through the water with Celeste on his left and Skipper on his right. Everything felt right. Even though the water was freezing due to nightfall, none of them were the least bit cold. They all had swam through much worse.
As time passed on, they weren't even close to the destination they had hoped for. All of them, began to tire sooner or later.The energy to keep going was scarce in all of them. The sky above the ocean was pitch...
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posted by legendary7
"Good morning, Skippah!" Private greeted, cheerfully. As he waddled up the beach, Celeste trudged behind him. Her light petite feet were suprisingly clumsy in the chilling morning sand.
"Good morning, Private." Skipper smiled. He breathed a sigh, and looked farther down the beach.
His eyes met Celeste's. They were dark-almost black. She kept them hidden with her low-hung-head. "Good morning, Celeste." He offered a polite smile.
She tilted her head up. At first, she was confused. Her eyes focused on Skipper who nervously waved. "Wait, he was talking to me? He did say my name. What do I do? Just...
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posted by legendary7
"There's something else you should probably see." Celeste sighed. Great, there's more! Just when Private thought it was hard, it had a chance of being worse. Truly, Private didn't want to ask his next question. Once again he would have to.
"What is it?" Private asked in a whisper. "Is it about your powers?"
She nodded. "It has something to do with them. In order to show you it, I need to use them." Private buried his face into her feathers, as he fluffed them with his fins gently. "Also, you need to remember that none of this I'm going to show you is real." She breathed.
"But then how are you-"...
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posted by legendary7
On the lead of Skipper, the penguins jumped out of their bunks. The screams contuined. "Skippah, help!" Private yelled. Skipper landed on his feet. The penguins got ready to face a monster, but what they were really going up against seemed to be a helpless little girl.
They leaped in front of the door. Skipper kicked the door aside. Each entered, searching for a threat on all sides. The only penguins in there were Celeste and Private. "I knew it!" Skipper thought.
"What happened here?!" Skipper yelled, shaking the lab.
"It's her leg!" Private cried pointing to Celeste, who had her flippers wrapped...
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Dream

It was a quiet day in the HQ. It might've even seemed too quiet for some and that "some" wasn't Skipper. To Kowalski, something didn't seem right.
He left the HQ for a while and looked around the zoo and everyone was present in the zoo. All except for one: Monique. He double checked the zoo, he even triple checked. She didn't say anything about leaving and she's talked to Kowalski about a lot.
What was also amazing was that no one else seemed to notice her disappearance except for him. Not even Skipper, and he always his parttime blood shot, highly trained eyes on everything. Kowalski had...
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Bridge

They were on different sides while it was burning. Both unable to see the other's face, they had tears slowly crawling out of their eyes, not just from the destruction of the bridge, but from the fact that there's no way they can be back together again.

The Distance
Kowalski's busy in his room writing on his clipboard and although he felt tired, he couldn't take a nap. Everytime he closed his eyes, all he could see is Monique sitting next to him and turning her head to see him. The bad thing about it is that it reminds him that she's no longer with him. He finished his writing on his clipboard,...
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posted by legendary7
Note: I was listening to this one song and I thought the lyrics totally fit this story. Not so much as a song but a poem. I have a few of the words. And no I did NOT copy off some one's idea to make a story based off this song. I was writing the story before I listened to it. It just fits. I hope you like it!

"There's a place that I know
It's not pretty there and few have ever
Gone.
If I show it to you now
Will it make you run away
Or will you stay
Even if it hurts?
Even if I push you out
Will you return?
And remind me who I really am.
Please remind me who I really am.
Everbody's got a dark...
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posted by legendary7
Private's question stung. It seemed as if she hadn't anticipated him asking. She closed her eyes and reminisced painfully. A bitter taste formed in her beak. It was like she could feel the cold hands grasping her again.
"Scientists," She answered simply, covering up her past.
"What intentions would they have in caging up a penguin in a lab for years?" Private wondered naïvely. Skipper elbowed Kowalski in the ribs.
"Uh… I'll explain later, Private." Kowalski said.
"No, it's fine. You see, there are some scientists. Evil scientists, who test chemicals out on animals. Sometimes, like in my case,...
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posted by legendary7
As soon as the reached their humble habitat, they entered the lab. Kowalski and Rico were still transporting the creature. She was only about Private's size and age and as thin as paper, but as heavy as Skipper.
"Private, if you could roll this examing table to us I'd greatly appreciate it. Rico, we're going to lift her up on three." Kowalski strained as they struggled under the weight of the little penguin.
The chubby penguin pushed the table in front of his friends.
"Three ... two ........ one!" Kowalski ordered.
The two strong penguins managed to put her soundly on the table without awakening...
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posted by ricoiswsome
One day in the central park zoo a new penguin arrived in the penguin habitat with a scar going down his right eye down to his left flipper but he hides a deadly secret. . .
Kowalski: We'll be invading Blowhole's base any questions?
Wolf: We're good.
Later that evening. . .
Kowalski: so did you leave any one behind in Colorado?
Wolf: No, did you?
Kowalski: yes, Dorris the dolphin
Later
Blowhole: welcome Wolf my old friend *evil laugh*
Kowalski: Wait. . . how do you know Blowhole?
Wolf: We used to be allies but the last time I trusted him he gave me this scar.
Blowhole: Now to unleash my penguin bomb,...
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